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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863210.1_cds_XP_016515582.1_27913
CDS Infomation

[gene=LOC107832280] [db_xref=GeneID:107832280] [protein=tRNA threonylcarbamoyladenosine dehydratase-like isoform X2] [protein_id=XP_016515582.1] [location=complement(join(21669..21779,22044..22101,22932..23056,24996..25211,25400..25534,26175..26309,28176..28388,29501..29648,31693..31745))] [gbkey=CDS]
Sequence

ATGACTACTCCAAACCTGTTGACTGATGAAGTAGTTTCCGAACAACTAACCAGGAATATG
CAGTTCTTTGGTCTTGAAGCCCAACAGAAAATCACTGCATCATATGTTGTGGTAATCGGT
CTTGGAGGAGTTGGAAGTCATGCTGCATCCATGCTTCTGAGGTCAGGGGTTGGACGGCTA
CTCCTTGTGGACTTCGACCAGGTCACAGTCTCCTCATTAAATAGACATGCTGTTGCCACA
AGAGAAGATGTTGGTACCCCAAAAGCCCTATGCCTTAAGAAGCACTTCCAATCAATTTTC
CCGGAGTGCCATATAGATGCAAAAGTTATCTTATATGATTCATCGTCCGAAGAAGAAATT
CTGTCTGGCCACCCTGACTTCGTCCTTGATTGTATTGATAATATCGACACAAAGGTGGCG
CTTCTTGCTGCATGTGTTCGAAGAGGTTTGAAAGTTTTATCTGCAACAGGAGCTGGCGTA
AGGGCTGATCCAACAAGAATTCGTGTGGCTGACTTGAGAGAGTCCACCAATGACCCTCTT
TCTCGAGCTGTAAGACATCGTTTGAGAAAAGATCATGGTATTGATGGTGGTATTCCTGTG
GTATTTTCTTTAGAGAAACCCAAGGCAAAACTGCTTCCCTTTAAAGGGCCGAGTGGAGAC
GAAGAAAATCCTTCAGATTATCAAATAGTGCCTGGATTTAGGGTCCGCATCATTCCAGTT
CTGGGGACTATACCTGCAATTTTTGGGCAAGTCATGGCTTCCTATGTTGCGACTCAACTA
GCTGGATTGCAAGTCCAGATGGAGCCAGTGGTGAACTTTGATACGGATCACTACCGAATC
CTCCATCAACGTCTAATTGAGCATGAAGAGTTGCTATATGGCACATCCATGCAAGTGGAG
GTAGATGTTGAAGAAGTTATGTACATTGCCAAAGAGTTGTGGCATGGGAGAAGTGCAAGA
GACCTATCTATTAAAGATGTAGGGCGTGCAATGTGGCGTTCTGTGAATGAGTTAATGCTT
GTGAGGTGGGACCAAACAAAGCCAGCCTCTGTGTCGAATCTAATCCTTCTAAGATTCAAA
GAGGCTGATGAACACGAGTCGAGGTCACTAGAAGATATAAAGGAAGAAGAACCAGAATTT
TTTGCTAGGGTGACATCTGTGCTTAAGCGAGCAGAATCGGAGTTTGGCTTCTAA

Peptide Sequence

PEP ID

XP_016515582.1
PEP Infomation

PREDICTED: tRNA threonylcarbamoyladenosine dehydratase-like isoform X2 [Nicotiana tabacum]
Sequence

MTTPNLLTDEVVSEQLTRNMQFFGLEAQQKITASYVVVIGLGGVGSHAASMLLRSGVGRL
LLVDFDQVTVSSLNRHAVATREDVGTPKALCLKKHFQSIFPECHIDAKVILYDSSSEEEI
LSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGVRADPTRIRVADLRESTNDPL
SRAVRHRLRKDHGIDGGIPVVFSLEKPKAKLLPFKGPSGDEENPSDYQIVPGFRVRIIPV
LGTIPAIFGQVMASYVATQLAGLQVQMEPVVNFDTDHYRILHQRLIEHEELLYGTSMQVE
VDVEEVMYIAKELWHGRSARDLSIKDVGRAMWRSVNELMLVRWDQTKPASVSNLILLRFK
EADEHESRSLEDIKEEEPEFFARVTSVLKRAESEFGF

Transcript Sequence

Gene sequence data has not been registered.